euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

269 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip21 chr1 8580824 8580824 . unknown germline . no 225 RERE
srip547 chr1 42483965 42483965 + unknown germline . no 225 HIVEP3
srip605 chr1 46453458 46453458 . unknown germline . no 225 MAST2
srip722 chr1 56154796 56154796 . unknown germline . no 225 .
srip1159 chr1 62390938 62390938 . unknown germline . no 225 INADL
srip1804 chr1 75192898 75192898 - unknown germline . no 225 CRYZ
srip2802 chr1 101978984 101978984 - unknown germline . no 225 .
srip3057 chr1 102568916 102568916 + unknown germline . no 225 .
srip3603 chr1 113440221 113440221 . unknown germline . no 225 .
srip4021 chr1 149026827 149026827 . unknown germline . no 225 NBPF17P
srip4119 chr1 149308428 149308428 + unknown germline . no 225 LOC645262
srip4489 chr1 158998588 158998588 . unknown germline . no 225 IFI16
srip4627 chr1 164453603 164453603 - unknown germline . no 225 .
srip5051 chr1 169524865 169524865 + unknown germline . no 225 F5
srip5425 chr1 179575369 179575369 - unknown germline . no 225 TDRD5
srip5780 chr1 189961334 189961334 - unknown germline . no 225 LOC647132
srip6068 chr1 192979533 192979533 . unknown germline . no 225 .
srip6425 chr1 217190831 217190831 . unknown germline . no 225 ESRRG
srip6997 chr1 225272510 225272510 + unknown germline . no 225 DNAH14
srip7630 chr10 5577550 5577550 . unknown germline . no 225 .
srip8008 chr10 19216658 19216658 + unknown germline . no 225 .
srip8462 chr10 25707693 25707693 - unknown germline . no 225 GPR158
srip8765 chr10 35458894 35458894 - unknown germline . no 225 CREM
srip8869 chr10 51583728 51583728 - unknown germline . no 225 NCOA4
srip9655 chr10 70432268 70432268 . unknown germline . no 225 TET1
srip9804 chr10 82972200 82972200 . unknown germline . no 225 .
srip10876 chr10 108993663 108993663 . unknown germline . no 225 .
srip12331 chr11 12529678 12529678 . unknown germline . no 225 PARVA
srip12541 chr11 15380252 15380252 + unknown germline . no 225 .
srip13193 chr11 28798145 28798145 - unknown germline . no 225 .
srip13812 chr11 33670130 33670130 + unknown germline . no 225 C11orf41
srip14258 chr11 41831803 41831803 . unknown germline . no 225 .
srip15909 chr11 72624883 72624883 . unknown germline . no 225 FCHSD2
srip16843 chr11 92730254 92730254 + unknown germline . no 225 .
srip17177 chr11 94684368 94684368 + unknown germline . no 225 .
srip18049 chr11 110377882 110377882 - unknown germline . no 225 .
srip18129 chr11 111082407 111082407 . unknown germline . no 225 .
srip18227 chr11 112084613 112084613 + unknown germline . no 225 BCO2
srip18477 chr11 123241793 123241793 + unknown germline . no 225 .
srip18543 chr11 124418642 124418642 + unknown germline . no 225 .
srip19245 chr11 134305645 134305645 - unknown germline . no 225 .
srip19756 chr12 11191379 11191379 - unknown germline . no 225 PRH1-PRR4
srip19893 chr12 11219195 11219195 - unknown germline . no 225 PRH1-PRR4
srip20140 chr12 12933687 12933687 - unknown germline . no 225 APOLD1
srip20423 chr12 25606885 25606885 . unknown germline . no 225 .
srip20740 chr12 28226420 28226420 - unknown germline . no 225 .
srip20898 chr12 33280447 33280447 + unknown germline . no 225 .
srip22213 chr12 43256979 43256979 - unknown germline . no 225 .
srip22868 chr12 51827649 51827649 . unknown germline . no 225 SLC4A8
srip23125 chr12 64261826 64261826 . unknown germline . no 225 SRGAP1
srip23140 chr12 66451382 66451382 . unknown germline . no 225 .
srip23696 chr12 77631328 77631328 + unknown germline . no 225 .
srip24626 chr12 84965140 84965140 + unknown germline . no 225 .
srip25099 chr12 95808453 95808453 - unknown germline . no 225 .
srip26909 chr13 22489798 22489798 + unknown germline . no 225 .
srip27364 chr13 27488117 27488117 + unknown germline . no 225 .
srip27872 chr13 40943034 40943034 + unknown germline . no 225 TTL
srip28040 chr13 43863342 43863342 . unknown germline . no 225 ENOX1
srip28276 chr13 51589991 51589991 + unknown germline . no 225 GUCY1B2
srip28338 chr13 57689705 57689705 - unknown germline . no 225 .
srip28589 chr13 61221164 61221164 - unknown germline . no 225 .
srip29075 chr13 61462340 61462340 - unknown germline . no 225 .
srip29645 chr13 61734491 61734491 . unknown germline . no 225 .
srip30639 chr13 78693217 78693217 + unknown germline . no 225 .
srip30981 chr13 79259790 79259790 - unknown germline . no 225 .
srip31572 chr13 85871607 85871607 - unknown germline . no 225 .
srip32314 chr13 91149416 91149416 - unknown germline . no 225 .
srip33522 chr13 104296230 104296230 - unknown germline . no 225 .
srip35194 chr14 28301256 28301256 + unknown germline . no 225 .
srip35872 chr14 36674752 36674752 + unknown germline . no 225 .
srip36088 chr14 37771477 37771477 . unknown germline . no 225 MIPOL1
srip36315 chr14 39875089 39875089 + unknown germline . no 225 FBXO33
srip37332 chr14 59220393 59220393 + unknown germline . no 225 .
srip37970 chr14 70611036 70611036 - unknown germline . no 225 SLC8A3
srip38933 chr14 103615622 103615622 + unknown germline . no 225 RPL21P12
srip39071 chr15 22755312 22755312 + unknown germline . no 225 .
srip39339 chr15 28175797 28175797 - unknown germline . no 225 OCA2
srip39627 chr15 37370819 37370819 . unknown germline . no 225 MEIS2
srip39735 chr15 37707890 37707890 - unknown germline . no 225 .
srip41035 chr15 55850511 55850511 + unknown germline . no 225 PYGO1
srip41771 chr15 68978376 68978376 - unknown germline . no 225 CORO2B
srip42261 chr15 77910870 77910870 . unknown germline . no 225 LINGO1
srip42607 chr15 85140901 85140901 + unknown germline . no 225 .
srip43061 chr15 100051012 100051012 + unknown germline . no 225 .
srip43248 chr15 100931152 100931152 - unknown germline . no 225 .
srip43576 chr16 6793828 6793828 + unknown germline . no 225 RBFOX1
srip44092 chr16 17755307 17755307 - unknown germline . no 225 .
srip44526 chr16 27425933 27425933 - unknown germline . no 225 IL21R
srip45503 chr16 33992437 33992437 . unknown germline . no 225 .
srip45904 chr16 63480373 63480373 + unknown germline . no 225 .
srip46315 chr16 71028016 71028016 + unknown germline . no 225 HYDIN
srip46368 chr16 73473840 73473840 + unknown germline . no 225 .
srip47206 chr17 28398310 28398310 + unknown germline . no 225 EFCAB5
srip47928 chr17 40565601 40565601 + unknown germline . no 225 PTRF
srip47951 chr17 48971508 48971508 . unknown germline . no 225 .
srip48479 chr17 69159663 69159663 . unknown germline . no 225 .
srip48973 chr18 15095255 15095255 - unknown germline . no 225 .
srip49757 chr18 35575101 35575101 . unknown germline . no 225 .
srip49800 chr18 42368771 42368771 . unknown germline . no 225 SETBP1
srip50387 chr18 51488332 51488332 - unknown germline . no 225 .
srip50819 chr18 52396140 52396140 + unknown germline . no 225 .
srip50843 chr18 57194495 57194495 - unknown germline . no 225 CCBE1
srip50907 chr18 59466368 59466368 + unknown germline . no 225 .
srip51611 chr18 74515281 74515281 - unknown germline . no 225 LOC100131655
srip51832 chr18 74960069 74960069 - unknown germline . no 225 .
srip52374 chr19 35870553 35870553 - unknown germline . no 225 .
srip52401 chr19 44450738 44450738 - unknown germline . no 225 .
srip52530 chr19 55509984 55509984 - unknown germline . no 225 NLRP2
srip52651 chr2 3946229 3946229 . unknown germline . no 225 .
srip52753 chr2 6798283 6798283 - unknown germline . no 225 .
srip52788 chr2 7050600 7050600 + unknown germline . no 225 .
srip53467 chr2 23191008 23191008 - unknown germline . no 225 .
srip53925 chr2 35879348 35879348 + unknown germline . no 225 .
srip54263 chr2 36570259 36570259 - unknown germline . no 225 .
srip56216 chr2 82098035 82098035 + unknown germline . no 225 .
srip56867 chr2 106163161 106163161 + unknown germline . no 225 .
srip58247 chr2 141852915 141852915 - unknown germline . no 225 LRP1B
srip58607 chr2 144304971 144304971 - unknown germline . no 225 ARHGAP15
srip59217 chr2 147020925 147020925 + unknown germline . no 225 .
srip60158 chr2 178676252 178676252 - unknown germline . no 225 PDE11A
srip60527 chr2 181000547 181000547 + unknown germline . no 225 .
srip61551 chr2 210934529 210934529 . unknown germline . no 225 C2orf67
srip61652 chr2 213114168 213114168 + unknown germline . no 225 ERBB4
srip61783 chr2 217537036 217537036 - unknown germline . no 225 IGFBP5
srip62122 chr2 221503759 221503759 - unknown germline . no 225 .
srip62207 chr2 226276984 226276984 . unknown germline . no 225 KIAA1486
srip62348 chr2 230341557 230341557 + unknown germline . no 225 DNER
srip63201 chr20 9477930 9477930 - unknown germline . no 225 .
srip63458 chr20 16479499 16479499 - unknown germline . no 225 KIF16B
srip64053 chr20 25903869 25903869 - unknown germline . no 225 .
srip64966 chr20 42385414 42385414 + unknown germline . no 225 .
srip64967 chr20 42529044 42529044 + unknown germline . no 225 .
srip65544 chr21 14390190 14390190 - unknown germline . no 225 .
srip65845 chr21 19517305 19517305 - unknown germline . no 225 .
srip66917 chr21 29069178 29069178 + unknown germline . no 225 .
srip67263 chr22 20720110 20720110 - unknown germline . no 225 USP41
srip68744 chr22 44324597 44324597 - unknown germline . no 225 PNPLA3
srip70041 chr3 12944164 12944164 + unknown germline . no 225 IQSEC1
srip70045 chr3 14222339 14222339 - unknown germline . no 225 LSM3
srip72830 chr3 58783871 58783871 + unknown germline . no 225 C3orf67
srip73372 chr3 59852896 59852896 + unknown germline . no 225 FHIT
srip73530 chr3 68173048 68173048 . unknown germline . no 225 FAM19A1
srip73941 chr3 76629486 76629486 - unknown germline . no 225 ROBO2
srip74444 chr3 80590169 80590169 - unknown germline . no 225 .
srip75295 chr3 84593281 84593281 . unknown germline . no 225 .
srip77242 chr3 123590719 123590719 + unknown germline . no 225 MYLK
srip77445 chr3 130621139 130621139 . unknown germline . no 225 ATP2C1
srip78081 chr3 140328816 140328816 + unknown germline . no 225 .
srip78160 chr3 143121766 143121766 - unknown germline . no 225 SLC9A9
srip78665 chr3 151148550 151148550 - unknown germline . no 225 MED12L
srip78957 chr3 156930424 156930424 . unknown germline . no 225 .
srip79254 chr3 159429184 159429184 + unknown germline . no 225 IQCJ-SCHIP1;SCHIP1
srip80350 chr3 176091325 176091325 + unknown germline . no 225 .
srip80696 chr3 181109912 181109912 - unknown germline . no 225 .
srip81491 chr3 186372132 186372132 + unknown germline . no 225 .
srip81775 chr3 191534526 191534526 . unknown germline . no 225 .
srip82116 chr3 193354172 193354172 - unknown germline . no 225 OPA1
srip82244 chr4 1708990 1708990 + unknown germline . no 225 SLBP
srip82358 chr4 9451067 9451067 . unknown germline . no 225 DEFB131
srip82412 chr4 10632686 10632686 - unknown germline . no 225 CLNK
srip82448 chr4 12951798 12951798 + unknown germline . no 225 .
srip82979 chr4 18162684 18162684 - unknown germline . no 225 .
srip83632 chr4 27198825 27198825 + unknown germline . no 225 .
srip84322 chr4 45340676 45340676 - unknown germline . no 225 .
srip84706 chr4 47007787 47007787 - unknown germline . no 225 .
srip85071 chr4 49602472 49602472 . unknown germline . no 225 .
srip86162 chr4 66413931 66413931 + unknown germline . no 225 EPHA5
srip86602 chr4 68522387 68522387 + unknown germline . no 225 UBA6
srip87330 chr4 80768529 80768529 + unknown germline . no 225 GDEP
srip87679 chr4 82515391 82515391 . unknown germline . no 225 .
srip89614 chr4 110248324 110248324 - unknown germline . no 225 .
srip89962 chr4 112628965 112628965 + unknown germline . no 225 .
srip90373 chr4 115395431 115395431 - unknown germline . no 225 .
srip90621 chr4 118332404 118332404 - unknown germline . no 225 .
srip90740 chr4 119296332 119296332 - unknown germline . no 225 .
srip91086 chr4 125230274 125230274 + unknown germline . no 225 .
srip91598 chr4 132181655 132181655 - unknown germline . no 225 .
srip92899 chr4 142537864 142537864 . unknown germline . no 225 .
srip94949 chr4 177461236 177461236 . unknown germline . no 225 .
srip95416 chr4 190816412 190816412 + unknown germline . no 225 .
srip95447 chr4 190969819 190969819 + unknown germline . no 225 .
srip95488 chr5 2206969 2206969 . unknown germline . no 225 .
srip96069 chr5 8749521 8749521 + unknown germline . no 225 .
srip96794 chr5 17267938 17267938 . unknown germline . no 225 BASP1
srip96813 chr5 19639110 19639110 - unknown germline . no 225 CDH18
srip96831 chr5 20555539 20555539 . unknown germline . no 225 .
srip96929 chr5 21873984 21873984 . unknown germline . no 225 CDH12
srip97009 chr5 23339374 23339374 - unknown germline . no 225 .
srip97733 chr5 33633341 33633341 - unknown germline . no 225 ADAMTS12
srip98656 chr5 49540496 49540496 - unknown germline . no 225 .
srip99055 chr5 55448002 55448002 . unknown germline . no 225 ANKRD55
srip99510 chr5 68263468 68263468 - unknown germline . no 225 .
srip99689 chr5 75733852 75733852 - unknown germline . no 225 IQGAP2
srip100737 chr5 89450775 89450775 + unknown germline . no 225 .
srip101706 chr5 107390991 107390991 + unknown germline . no 225 FBXL17
srip102507 chr5 109567533 109567533 + unknown germline . no 225 .
srip102843 chr5 119765825 119765825 - unknown germline . no 225 .
srip103353 chr5 125040043 125040043 + unknown germline . no 225 .
srip103597 chr5 135023720 135023720 . unknown germline . no 225 .
srip104210 chr5 144331003 144331003 - unknown germline . no 225 .
srip104855 chr5 154873935 154873935 - unknown germline . no 225 .
srip105817 chr5 164495152 164495152 - unknown germline . no 225 LOC100507193
srip106595 chr6 1674200 1674200 . unknown germline . no 225 GMDS
srip107068 chr6 13191024 13191024 + unknown germline . no 225 PHACTR1
srip107730 chr6 19258220 19258220 + unknown germline . no 225 .
srip107785 chr6 26272953 26272953 . unknown germline . no 225 .
srip108001 chr6 32509105 32509105 - unknown germline . no 225 .
srip108701 chr6 46310298 46310298 + unknown germline . no 225 .
srip109125 chr6 57494221 57494221 - unknown germline . no 225 PRIM2
srip111046 chr6 77980645 77980645 - unknown germline . no 225 .
srip112042 chr6 91669514 91669514 - unknown germline . no 225 .
srip112695 chr6 102283763 102283763 - unknown germline . no 225 GRIK2
srip113481 chr6 128935628 128935628 - unknown germline . no 225 .
srip113816 chr6 142450105 142450105 - unknown germline . no 225 .
srip114428 chr6 148163578 148163578 + unknown germline . no 225 .
srip114776 chr6 148195798 148195798 + unknown germline . no 225 .
srip115692 chr6 162181262 162181262 + unknown germline . no 225 PARK2
srip116060 chr7 5787401 5787401 + unknown germline . no 225 RNF216
srip116203 chr7 10500040 10500040 . unknown germline . no 225 .
srip117705 chr7 55830739 55830739 . unknown germline . no 225 .
srip117706 chr7 56305338 56305338 . unknown germline . no 225 .
srip117710 chr7 57555042 57555042 . unknown germline . no 225 .
srip118307 chr7 62492938 62492938 + unknown germline . no 225 .
srip118884 chr7 70188682 70188682 - unknown germline . no 225 AUTS2
srip119821 chr7 84901724 84901724 - unknown germline . no 225 .
srip120389 chr7 87333212 87333212 . unknown germline . no 225 ABCB1;RUNDC3B
srip120425 chr7 89564908 89564908 - unknown germline . no 225 .
srip121094 chr7 105741898 105741898 . unknown germline . no 225 SYPL1
srip121733 chr7 107829256 107829256 + unknown germline . no 225 NRCAM
srip122001 chr7 108325669 108325669 + unknown germline . no 225 .
srip122685 chr7 124451326 124451326 - unknown germline . no 225 .
srip123113 chr7 132306006 132306006 - unknown germline . no 225 PLXNA4
srip123116 chr7 133282326 133282326 + unknown germline . no 225 EXOC4
srip124061 chr8 4452901 4452901 - unknown germline . no 225 CSMD1
srip124382 chr8 5829282 5829282 - unknown germline . no 225 .
srip125054 chr8 22755935 22755935 + unknown germline . no 225 PEBP4
srip125438 chr8 24926547 24926547 - unknown germline . no 225 .
srip125674 chr8 33736441 33736441 . unknown germline . no 225 .
srip126889 chr8 67381884 67381884 - unknown germline . no 225 .
srip127434 chr8 72399228 72399228 - unknown germline . no 225 .
srip128279 chr8 87315042 87315042 + unknown germline . no 225 .
srip128448 chr8 92186274 92186274 - unknown germline . no 225 LRRC69
srip129139 chr8 115788572 115788572 - unknown germline . no 225 .
srip130343 chr8 134972233 134972233 + unknown germline . no 225 .
srip130603 chr9 5406234 5406234 + unknown germline . no 225 C9orf46
srip131391 chr9 8344967 8344967 + unknown germline . no 225 PTPRD
srip131731 chr9 19671056 19671056 - unknown germline . no 225 SLC24A2
srip131860 chr9 23265835 23265835 . unknown germline . no 225 .
srip133402 chr9 32463891 32463891 - unknown germline . no 225 DDX58
srip133648 chr9 34904794 34904794 - unknown germline . no 225 .
srip134511 chr9 94058483 94058483 - unknown germline . no 225 AUH
srip134619 chr9 99186861 99186861 . unknown germline . no 225 .
srip134704 chr9 100675542 100675542 - unknown germline . no 225 C9orf156
srip134708 chr9 100820191 100820191 . unknown germline . no 225 NANS
srip134713 chr9 101561004 101561004 . unknown germline . no 225 .
srip135089 chr9 105073661 105073661 . unknown germline . no 225 .
srip135872 chr9 118083873 118083873 - unknown germline . no 225 DEC1
srip137229 chrX 54917144 54917144 + unknown germline . no 225 .
srip137795 chrX 61799456 61799456 . unknown germline . no 225 .
srip138511 chrX 73679072 73679072 . unknown germline . no 225 SLC16A2
srip139277 chrX 84009827 84009827 . unknown germline . no 225 TEX16P
srip139455 chrX 86500636 86500636 - unknown germline . no 225 .
srip139776 chrX 98264296 98264296 - unknown germline . no 225 .
srip140083 chrX 102363181 102363181 + unknown germline . no 225 .
srip140460 chrX 111557754 111557754 - unknown germline . no 225 ZCCHC16
srip140526 chrX 116025284 116025284 + unknown germline . no 225 .
srip141370 chrX 129525275 129525275 - unknown germline . no 225 .
srip141973 chrX 140515265 140515265 - unknown germline . no 225 .
srip142196 chrY 6948108 6948108 - unknown germline . no 225 TBL1Y